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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs71478720 chr11:112009605 C/T 3.3E-5 487 16.63 15.9 12.37 KM Plot
THCA rs71481529 chr10:81627553 A/G 5.32E-5 469 15.67 17.63 6.03 KM Plot
THCA rs71481530 chr10:81643234 A/C 2.33E-5 477 15 17.93 6.03 KM Plot
THCA rs71497466 chr9:132292790 GA/G 0 485 16.13 15.17 9.57 KM Plot
THCA rs71537089 chr6:99321077 C/A 2.31E-5 488 15.65 18.13 25.13 KM Plot
THCA rs71537693 chr12:15057859 C/T 5.58E-5 470 17 14.87 11.5 KM Plot
THCA rs71562926 chr7:64282832 A/T 1.11E-15 489 16.33 14.23 17.32 KM Plot
THCA rs7156456 chr14:90864608 T/G 9.38E-9 478 14.8 15.23 15.9 KM Plot
THCA rs71607116 chr4:157382861 T/C 0.000152 489 16.05 15.93 15.17 KM Plot
THCA rs7162443 chr15:41530032 T/C 0.000256 479 15.17 15.87 17.62 KM Plot
THCA rs7162503 chr15:41547692 A/G 0.000275 471 15.17 15.9 17 KM Plot
THCA rs7162992 chr15:41290861 T/C 0.000149 489 15.13 16.33 16.83 KM Plot
THCA rs71634371 chr1:3701832 C/A 6.28E-5 481 15.93 15.78 19.13 KM Plot
THCA rs71638823 chr1:22374032 C/T 4.14E-8 487 15.32 17.73 9.47 KM Plot
THCA rs7167813 chr15:41539445 G/T 0.000214 485 15.15 15.9 17.62 KM Plot